Bo7g077820 (Brassica oleracea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Bo7g077820 T247999_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G47660
M02266_2.00 		Arabidopsis thaliana
RCGGTAAW
WTTACCGY		 PBM
Weirauch et al.(2014)
pTH7911 		0.838 0.786
AT5G47660
M06980_2.00 		Arabidopsis thaliana
RCRGTWAAAAHDDHW
WDHHDTTTTWACYGY		 Dap-seq
OMalley et al.(2016)
AT5G47660_col_a 		0.838 0.786
AT5G47660
M06981_2.00 		Arabidopsis thaliana
WHHHHRCRGTWAAWW
WWTTWACYGYDDDDW		 Dap-seq
OMalley et al.(2016)
AT5G47660_colamp_a 		0.838 0.786
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g077820.1 MADF 289 361

Links

Other MADF family TFs
Other Brassica oleracea TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G47660 Arabidopsis thaliana AT5G47660 D 0.838
Bostr.14419s0059 Boechera stricta Bostr.14419s0059 I 0.812