SELMODRAFT_130409 (Selaginella moellendorffii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 SELMODRAFT_130409 T249790_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.863 0.603
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.863 0.603
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.863 0.603
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.856 0.603
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ09246 MADF 31 108

Links

Other MADF family TFs
Other Selaginella moellendorffii TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_134056 Selaginella moellendorffii SELMODRAFT_134056 I 0.971
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I 0.899
29815.m000504 Ricinus communis 29815.m000504 I 0.893
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I 0.893
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I 0.881
Cla018015 Citrullus lanatus Cla018015 I 0.872
Cucsa.378670 Cucumis sativus Cucsa.378670 I 0.872
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I 0.863
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I 0.863
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I 0.863
AT3G10030 Arabidopsis thaliana AT3G10030 D 0.863
Carubv10015256m.g Capsella rubella Carubv10015256m.g I 0.863
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I 0.863
Eucgr.A01571 Eucalyptus grandis Eucgr.A01571 I 0.860
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I 0.860
Pm026265 Prunus mume Pm026265 I 0.859
PRUPE_ppa004154mg Prunus persica PRUPE_ppa004154mg I 0.859
Gorai.007G371500 Gossypium raimondii Gorai.007G371500 I 0.858
PK04914.1 Cannabis sativa PK04914.1 D 0.856
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I 0.855
MTR_1g061600 Medicago truncatula MTR_1g061600 I 0.855
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I 0.855
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I 0.854
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I 0.853
Ca_20148 Cicer arietinum Ca_20148 I 0.850
GLYMA10G07490 Glycine max GLYMA10G07490 I 0.847
GLYMA13G21371 Glycine max GLYMA13G21371 I 0.847
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I 0.845
Bra029812 Brassica rapa Bra029812 I 0.840
Bo5g137800 Brassica oleracea Bo5g137800 I 0.840
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I 0.838
TCM_022397 Theobroma cacao TCM_022397 I 0.834
MDP0000201016 Malus domestica MDP0000201016 I 0.833
MDP0000415733 Malus domestica MDP0000415733 I 0.833
MDP0000399495 Malus domestica MDP0000399495 I 0.833
GLYMA10G34520 Glycine max GLYMA10G34520 I 0.833
POPTR_0006s11850 Populus trichocarpa POPTR_0006s11850 I 0.830
SapurV1A.0226s0070 Salix purpurea SapurV1A.0226s0070 I 0.830
gene30101-v1.0-hybrid Fragaria vesca gene30101-v1.0-hybrid I 0.830
28077.m000081 Ricinus communis 28077.m000081 I 0.813
AMTR_s00006p00265300 Amborella trichopoda AMTR_s00006p00265300 I 0.813
GSMUA_Achr6G13420_001 Musa acuminata GSMUA_Achr6G13420_001 I 0.812