CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GPLIN_000275200
(
Globodera pallida
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
GPLIN_000275200
T251973_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000275200
MADF
134
212
LVEEVSRHPALFDFTRDEYKSTEARNRHWGEVAAEMNQTVEFVRTRWKTLRDRFKKEVRRQHQCVEGPIWQHYEKMLYL
Links
Other
MADF
family TFs
Other
Globodera pallida
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MhA1_Contig1279.frz3.gene2
Meloidogyne hapla
MhA1_Contig1279.frz3.gene2
N
0.935
Minc18563
Meloidogyne incognita
Minc18563
N
0.929
maker-nMf.1.1.scaf08147-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf08147-augustus-gene-0.6
N
0.895