CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf08147-augustus-gene-0.6
(
Meloidogyne floridensis
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
maker-nMf.1.1.scaf08147-augustus-gene-0.6
T252280_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf08147-augustus-gene-0.6-mRNA-1
MADF
110
208
LIKEISQHPALFDFTCDEYKSIEARNRNWDEVSSNSSRNRNWDEVSSHSCQPLEFVRTRWKTLRDRFKKEVRRIKQQQLQQPENAFNGCWHHFEEMLFL
Links
Other
MADF
family TFs
Other
Meloidogyne floridensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc18563
Meloidogyne incognita
Minc18563
N
0.947
MhA1_Contig1279.frz3.gene2
Meloidogyne hapla
MhA1_Contig1279.frz3.gene2
N
0.928
GPLIN_000275200
Globodera pallida
GPLIN_000275200
N
0.895