CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LPERR11G15320
(
Leersia perrieri
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
LPERR11G15320
T254587_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR11G15320.1
MADS box
10
57
RINNAEAQQVCFSKHRPSVFKKASELYTLCGAEVAMLVKSSGGNLFSF
Links
Other
MADS box
family TFs
Other
Leersia perrieri
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR06G13350
Leersia perrieri
LPERR06G13350
N
0.833
BGIOSGA022830
Oryza indica
BGIOSGA022830
N
0.812
OLONG_015132
Oryza longistaminata
OLONG_015132
N
0.812
ONIVA06G15960
Oryza nivara
ONIVA06G15960
N
0.812
ORGLA06G0273400
Oryza glaberrima
ORGLA06G0273400
N
0.812
ORUFI06G14240
Oryza rufipogon
ORUFI06G14240
N
0.812
OBART06G13310
Oryza barthii
OBART06G13310
N
0.792
OGLUM06G14250
Oryza glumaepatula
OGLUM06G14250
N
0.792
OPUNC06G12720
Oryza punctata
OPUNC06G12720
N
0.771
OB06G21580
Oryza brachyantha
OB06G21580
N
0.750