ORGLA06G0273400 (Oryza glaberrima)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ORGLA06G0273400 T255398_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA06G0273400.1 MADS box 10 57

Links

Other MADS box family TFs
Other Oryza glaberrima TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA022830 Oryza indica BGIOSGA022830 N 1.000
OLONG_015132 Oryza longistaminata OLONG_015132 N 1.000
ONIVA06G15960 Oryza nivara ONIVA06G15960 N 1.000
ORUFI06G14240 Oryza rufipogon ORUFI06G14240 N 1.000
OBART06G13310 Oryza barthii OBART06G13310 N 0.979
OGLUM06G14250 Oryza glumaepatula OGLUM06G14250 N 0.979
LPERR06G13350 Leersia perrieri LPERR06G13350 N 0.896
OPUNC06G12720 Oryza punctata OPUNC06G12720 N 0.896
OB06G21580 Oryza brachyantha OB06G21580 N 0.833
LPERR11G15320 Leersia perrieri LPERR11G15320 N 0.812
Sb07g007306 Sorghum bicolor Sb07g007306 N 0.771
Sb07g007373 Sorghum bicolor Sb07g007373 N 0.771
GRMZM2G459864 Zea mays GRMZM2G459864 N 0.750
F775_04223 Aegilops tauschii F775_04223 I 0.729
F775_43210 Aegilops tauschii F775_43210 I 0.729
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.729
Sb0836s002010 Sorghum bicolor Sb0836s002010 N 0.729
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.729
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.729
OBART02G04930 Oryza barthii OBART02G04930 N 0.724
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.708
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.708
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.708
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.708
Sb06g015640 Sorghum bicolor Sb06g015640 N 0.708
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.708
Si019951m.g Setaria italica Si019951m.g I 0.708
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.708
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.708
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.708
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.708