CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G459864
(
Zea mays
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
GRMZM2G459864
T254326_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G459864_P01
MADS box
18
65
CIQGEEARQVCFSKRRPSLFKKASELSTLCGAEVAVVTFSPGGKCFSF
Links
Other
MADS box
family TFs
Other
Zea mays
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb07g007306
Sorghum bicolor
Sb07g007306
N
0.938
Sb07g007373
Sorghum bicolor
Sb07g007373
N
0.938
Sb06g015640
Sorghum bicolor
Sb06g015640
N
0.896
Sb0836s002010
Sorghum bicolor
Sb0836s002010
N
0.896
F775_04223
Aegilops tauschii
F775_04223
I
0.771
TRAES3BF106100060CFD_g
Triticum aestivum
TRAES3BF106100060CFD_g
I
0.771
AC234185.1_FG006
Zea mays
AC234185.1_FG006
I
0.750
BGIOSGA022830
Oryza indica
BGIOSGA022830
N
0.750
F775_43210
Aegilops tauschii
F775_43210
I
0.750
GRMZM5G891280
Zea mays
GRMZM5G891280
I
0.750
GSMUA_Achr5G26530_001
Musa acuminata
GSMUA_Achr5G26530_001
I
0.750
OLONG_015132
Oryza longistaminata
OLONG_015132
N
0.750
ONIVA06G15960
Oryza nivara
ONIVA06G15960
N
0.750
ORGLA06G0273400
Oryza glaberrima
ORGLA06G0273400
N
0.750
ORUFI06G14240
Oryza rufipogon
ORUFI06G14240
N
0.750
Sb09g029120
Sorghum bicolor
Sb09g029120
I
0.750
Si019951m.g
Setaria italica
Si019951m.g
I
0.750
Traes_6DL_609A01BD5
Triticum aestivum
Traes_6DL_609A01BD5
I
0.750
Pavir.J00788
Panicum virgatum
Pavir.J00788
I
0.750
Pavir.J11717
Panicum virgatum
Pavir.J11717
I
0.750
BRADI3G18670
Brachypodium distachyon
BRADI3G18670
N
0.729
GSMUA_Achr8G07230_001
Musa acuminata
GSMUA_Achr8G07230_001
I
0.729
OBART06G13310
Oryza barthii
OBART06G13310
N
0.729
OGLUM06G14250
Oryza glumaepatula
OGLUM06G14250
N
0.729
OPUNC06G12720
Oryza punctata
OPUNC06G12720
N
0.729
OPUNC09G00580
Oryza punctata
OPUNC09G00580
N
0.729
28830.m000229
Ricinus communis
28830.m000229
N
0.729
BGIOSGA005284
Oryza indica
BGIOSGA005284
N
0.708
BGIOSGA030217
Oryza indica
BGIOSGA030217
N
0.708
LPERR06G13350
Leersia perrieri
LPERR06G13350
N
0.708
OBART01G45740
Oryza barthii
OBART01G45740
N
0.708
OBART09G00850
Oryza barthii
OBART09G00850
N
0.708
OGLUM01G50090
Oryza glumaepatula
OGLUM01G50090
N
0.708
OGLUM09G01140
Oryza glumaepatula
OGLUM09G01140
N
0.708
OLONG_018222
Oryza longistaminata
OLONG_018222
N
0.708
OLONG_027660
Oryza longistaminata
OLONG_027660
N
0.708
OMERI09G00900
Oryza meridionalis
OMERI09G00900
N
0.708
ONIVA01G52000
Oryza nivara
ONIVA01G52000
N
0.708
ONIVA09G00960
Oryza nivara
ONIVA09G00960
N
0.708
OPUNC01G44670
Oryza punctata
OPUNC01G44670
N
0.708
ORGLA01G0394900
Oryza glaberrima
ORGLA01G0394900
N
0.708
ORGLA09G0007400
Oryza glaberrima
ORGLA09G0007400
N
0.708
ORUFI01G49230
Oryza rufipogon
ORUFI01G49230
N
0.708
ORUFI09G00870
Oryza rufipogon
ORUFI09G00870
N
0.708
OS01G0975800
Oryza sativa
OS01G0975800
N
0.708
OS09G0116800
Oryza sativa
OS09G0116800
N
0.708
Aquca_041_00050
Aquilegia coerulea
Aquca_041_00050
N
0.708
Aquca_054_00126
Aquilegia coerulea
Aquca_054_00126
N
0.708
Pavir.Ba03370
Panicum virgatum
Pavir.Ba03370
N
0.708
Pavir.Bb00804
Panicum virgatum
Pavir.Bb00804
N
0.708