CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM03G24530
(
Oryza glumaepatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OGLUM03G24530
T255038_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM03G24530.1
MADS box
1
36
MFKKRQKSLMKKASELSTLYGVDACVVMYAEGEAQP
Links
Other
MADS box
family TFs
Other
Oryza glumaepatula
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA03G0221500
Oryza glaberrima
ORGLA03G0221500
N
1.000
OBART03G23720
Oryza barthii
OBART03G23720
N
0.857
OBART03G23730
Oryza barthii
OBART03G23730
N
0.857
OLONG_009236
Oryza longistaminata
OLONG_009236
N
0.857
ONIVA03G25450
Oryza nivara
ONIVA03G25450
N
0.857
ORUFI03G24400
Oryza rufipogon
ORUFI03G24400
N
0.857
Pavir.Ib03850
Panicum virgatum
Pavir.Ib03850
N
0.771