CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM10G10610
(
Oryza glumaepatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OGLUM10G10610
T255078_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM10G10610.1
MADS box
19
66
CIEGKEKQQVTCSKRRRGLFKKASELSRTSGASIAIVSFSKAGNVFAF
Links
Other
MADS box
family TFs
Other
Oryza glumaepatula
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA021177
Oryza indica
BGIOSGA021177
N
0.875
OGLUM06G17330
Oryza glumaepatula
OGLUM06G17330
N
0.875
ONIVA06G19160
Oryza nivara
ONIVA06G19160
N
0.875
ORUFI06G17190
Oryza rufipogon
ORUFI06G17190
N
0.875
OMERI06G17270
Oryza meridionalis
OMERI06G17270
N
0.854
ORGLA06G0135300
Oryza glaberrima
ORGLA06G0135300
N
0.854
OPUNC06G14740
Oryza punctata
OPUNC06G14740
N
0.833