CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI06G17190
(
Oryza rufipogon
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ORUFI06G17190
T255469_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI06G17190.1
MADS box
19
66
CIDGKEKRQVTFSKRRRGLFKKASEISTLSGASIAIVSFSKAGNVFAF
Links
Other
MADS box
family TFs
Other
Oryza rufipogon
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA021177
Oryza indica
BGIOSGA021177
N
1.000
OGLUM06G17330
Oryza glumaepatula
OGLUM06G17330
N
1.000
ONIVA06G19160
Oryza nivara
ONIVA06G19160
N
1.000
ORGLA06G0135300
Oryza glaberrima
ORGLA06G0135300
N
0.979
OMERI06G17270
Oryza meridionalis
OMERI06G17270
N
0.938
OGLUM10G10610
Oryza glumaepatula
OGLUM10G10610
N
0.875
OPUNC06G14740
Oryza punctata
OPUNC06G14740
N
0.792
OGLUM06G17310
Oryza glumaepatula
OGLUM06G17310
N
0.750
OMERI06G17150
Oryza meridionalis
OMERI06G17150
N
0.750
ONIVA06G15740
Oryza nivara
ONIVA06G15740
N
0.750
ORGLA06G0135200
Oryza glaberrima
ORGLA06G0135200
N
0.750
ORUFI06G17170
Oryza rufipogon
ORUFI06G17170
N
0.750
OS06G0504100
Oryza sativa
OS06G0504100
N
0.750
OPUNC06G14730
Oryza punctata
OPUNC06G14730
N
0.729