CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI01G38410
(
Oryza meridionalis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OMERI01G38410
T255159_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI01G38410.1
MADS box
22
44
EQRMRLVRKASELATRCAVPVAL
OMERI01G38410.1
MADS box
333
376
GEQRRAALEMRKERLVRKASSLATRCDVPVAVICPGVGAGGEPT
Links
Other
MADS box
family TFs
Other
Oryza meridionalis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA01G46540
Oryza nivara
ONIVA01G46540
N
0.985
OPUNC01G40210
Oryza punctata
OPUNC01G40210
N
0.785
OPUNC01G40260
Oryza punctata
OPUNC01G40260
N
0.785