CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ONIVA01G46540
(
Oryza nivara
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ONIVA01G46540
T255223_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA01G46540.1
MADS box
26
48
EQRMRLVRKASELATRCAVPVAL
ONIVA01G46540.1
MADS box
416
460
ASEQRRAALEMRKERLVRKASSLATRCDVPVAVICPGVGAGGEPT
Links
Other
MADS box
family TFs
Other
Oryza nivara
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI01G38410
Oryza meridionalis
OMERI01G38410
N
0.985