CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA01G16990
(
Oryza nivara
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ONIVA01G16990
T255218_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA01G16990.1
MADS box
10
55
LIAHRQKRAATYAKRKESLRKKAEELSTLCGVRVAFVCAGPVVPGG
Links
Other
MADS box
family TFs
Other
Oryza nivara
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA003441
Oryza indica
BGIOSGA003441
N
1.000
ORUFI01G15830
Oryza rufipogon
ORUFI01G15830
N
1.000
OS01G0340100
Oryza sativa
OS01G0340100
N
1.000
OGLUM01G15990
Oryza glumaepatula
OGLUM01G15990
N
0.977
OBART01G14240
Oryza barthii
OBART01G14240
N
0.953
OPUNC01G13870
Oryza punctata
OPUNC01G13870
N
0.930