CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS01G0340100
(
Oryza sativa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OS01G0340100
T255493_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS01T0340100-00
MADS box
10
55
LIAHRQKRAATYAKRKESLRKKAEELSTLCGVRVAFVCAGPVVPGG
Links
Other
MADS box
family TFs
Other
Oryza sativa
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA003441
Oryza indica
BGIOSGA003441
N
1.000
ONIVA01G16990
Oryza nivara
ONIVA01G16990
N
1.000
ORUFI01G15830
Oryza rufipogon
ORUFI01G15830
N
1.000
OGLUM01G15990
Oryza glumaepatula
OGLUM01G15990
N
0.977
OBART01G14240
Oryza barthii
OBART01G14240
N
0.953
OPUNC01G13870
Oryza punctata
OPUNC01G13870
N
0.930