CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400042442
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400042442
T255713_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400092871
MADS box
16
63
KIEKEAARYASFSKRRLSLYKKASELVRECDVDLGIFISSQTGKPYSF
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc04g025970.1
Solanum lycopersicum
Solyc04g025970.1
N
0.812
PGSC0003DMG400037384
Solanum tuberosum
PGSC0003DMG400037384
N
0.729
Solyc10g018070.1
Solanum lycopersicum
Solyc10g018070.1
N
0.729
Solyc01g097850.1
Solanum lycopersicum
Solyc01g097850.1
N
0.708
Solyc10g018080.1
Solanum lycopersicum
Solyc10g018080.1
N
0.708
Solyc10g018110.1
Solanum lycopersicum
Solyc10g018110.1
N
0.708