CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc10g018110.1
(
Solanum lycopersicum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Solyc10g018110.1
T256370_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc10g018110.1.1
MADS box
16
63
KIENESARLTTFSKRRSGLYKKACELVRECDVALGIVMSSPKGIPYSF
Links
Other
MADS box
family TFs
Other
Solanum lycopersicum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc10g018080.1
Solanum lycopersicum
Solyc10g018080.1
N
0.958
Solyc10g018070.1
Solanum lycopersicum
Solyc10g018070.1
N
0.938
Solyc04g056740.1
Solanum lycopersicum
Solyc04g056740.1
N
0.771
PGSC0003DMG400037384
Solanum tuberosum
PGSC0003DMG400037384
N
0.708
PGSC0003DMG400042442
Solanum tuberosum
PGSC0003DMG400042442
N
0.708
PGSC0003DMG400042688
Solanum tuberosum
PGSC0003DMG400042688
N
0.708
PGSC0003DMG400044761
Solanum tuberosum
PGSC0003DMG400044761
N
0.708