Traes_7DS_7A30E1397 (Triticum aestivum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Traes_7DS_7A30E1397 T256629_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL16
M06987_2.00 		Arabidopsis thaliana
TWCCHAAWDDGGWAA
TTWCCHHWTTDGGWA		 Dap-seq
OMalley et al.(2016)
AGL16_col_a 		0.727 0.727
AGL16
M06988_2.00 		Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS
STTTCCHWWTWDGGWAANWHW		 Dap-seq
OMalley et al.(2016)
AGL16_colamp_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_7DS_7A30E1397.1 MADS box 1 44

Links

Other MADS box family TFs
Other Triticum aestivum TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIUR3_09266 Triticum urartu TRIUR3_09266 I 0.864
Traes_5DS_82FA431DB Triticum aestivum Traes_5DS_82FA431DB I 0.854
F775_15097 Aegilops tauschii F775_15097 I 0.812
Traes_5AS_E9E60BA43 Triticum aestivum Traes_5AS_E9E60BA43 I 0.792
Traes_7AS_EFE436F1D Triticum aestivum Traes_7AS_EFE436F1D I 0.792
Traes_7BS_209950516 Triticum aestivum Traes_7BS_209950516 I 0.771
Traes_7DS_7F8C88C92 Triticum aestivum Traes_7DS_7F8C88C92 I 0.766
F775_15098 Aegilops tauschii F775_15098 I 0.766
ANR1 Vitis vinifera VIT_18s0001g07900 I 0.750
Thhalv10022995m.g Eutrema salsugineum Thhalv10022995m.g I 0.750
PK27158.1 Cannabis sativa PK27158.1 I 0.743
Cucsa.331900 Cucumis sativus Cucsa.331900 I 0.727
VIT_00s0211g00150 Vitis vinifera VIT_00s0211g00150 I 0.727
Solyc02g091550.1 Solanum lycopersicum Solyc02g091550.1 I 0.727
cassava4651.m1 Manihot esculenta cassava4651.m1 I 0.727
gene26429-v1.0-hybrid Fragaria vesca gene26429-v1.0-hybrid I 0.727
mgf021543m Mimulus guttatus mgf021543m I 0.705
gene25618-v1.0-hybrid Fragaria vesca gene25618-v1.0-hybrid I 0.705
SapurV1A.0027s0860 Salix purpurea SapurV1A.0027s0860 I 0.705
Gorai.003G090800 Gossypium raimondii Gorai.003G090800 I 0.705
Pm021962 Prunus mume Pm021962 I 0.705
SELMODRAFT_450818 Selaginella moellendorffii SELMODRAFT_450818 I 0.705
SELMODRAFT_450937 Selaginella moellendorffii SELMODRAFT_450937 I 0.705
cassava33801.m1 Manihot esculenta cassava33801.m1 I 0.705
PRUPE_ppa024736mg Prunus persica PRUPE_ppa024736mg I 0.705
GSMUA_Achr3G07310_001 Musa acuminata GSMUA_Achr3G07310_001 I 0.705
AGL15 Populus trichocarpa POPTR_0009s06060 I 0.705
Traes_7AS_360247894 Triticum aestivum Traes_7AS_360247894 I 0.700