CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
27893.m000228
(
Ricinus communis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
27893.m000228
T257131_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
27893.m000228
MADS box
11
62
KLESQKQRSVSFTKRRNGLFNKAAELFMLCDAQLAVLVASPCSKPKRKVYSF
Links
Other
MADS box
family TFs
Other
Ricinus communis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28180.m000391
Ricinus communis
28180.m000391
N
0.851
cassava9486.m1
Manihot esculenta
cassava9486.m1
N
0.812
evm.TU.supercontig_1046.4
Carica papaya
evm.TU.supercontig_1046.4
N
0.708