fgeneshPB_pg.6__462 (Phycomyces blakesleeanus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 fgeneshPB_pg.6__462 T257364_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MEF2A
M03340_2.00 		Homo sapiens
KCTAWAAATAGM
KCTATTTWTAGM		 SELEX
Jolma et al.(2013)
MEF2A_1 		0.708 0.708
MEF2A
M07979_2.00 		Homo sapiens
NDDHYAAAAATARHH
DDYTATTTTTRDHHN		 ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2A_HudsonAlpha 		0.708 0.708
MEF2A
M08212_2.00 		Homo sapiens
CTAWWWWTAG
CTAWWWWTAG		 ChIP-seq
Contrino et al.(2012)
Mv88 		0.708 0.708
MEF2A
M08213_2.00 		Homo sapiens
AAAATAGM
KCTATTTT		 ChIP-seq
Contrino et al.(2012)
Mv90 		0.708 0.708
MEF2A
M09247_2.00 		Homo sapiens
DYYAAAAATAGMH
DKCTATTTTTRRH		 Misc
Kulakovskiy et al.(2013)
MEF2A_HUMAN.H11MO.0.A 		0.708 0.708
Mef2a
M09255_2.00 		Mus musculus
DDCYAWAAATARMH
DKYTATTTWTRGHH		 Misc
Kulakovskiy et al.(2013)
MEF2A_MOUSE.H11MO.0.A 		0.708 0.708
Mef2a
M09599_2.00 		Mus musculus
CYNDAAATAG
CTATTTHNRG		 Misc
Heinz et al.(2010)
HL1-Mef2a.biotin_GSE21529 		0.708 0.708
MEF2A
M10933_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AMEF2_Q6 		0.708 0.708
MEF2A
M10934_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMEF2_Q6 		0.708 0.708
MEF2A
M10935_2.00 		Homo sapiens
BTCTAAAAATAACYCY
RGRGTTATTTTTAGAV		 Transfac
Matys et al.(2006)
V$MEF2_01 		0.708 0.708
MEF2A
M10936_2.00 		Homo sapiens
BNNNDDDCTAWAAATAGMHNNN
NNNDKCTATTTWTAGHHHNNNV		 Transfac
Matys et al.(2006)
V$MEF2_02 		0.708 0.708
MEF2A
M10937_2.00 		Homo sapiens
NNNNDWKCTAWAAATAGMHHNN
NNDDKCTATTTWTAGMWHNNNN		 Transfac
Matys et al.(2006)
V$MEF2_03 		0.708 0.708
MEF2A
M10938_2.00 		Homo sapiens
NVTGTTRCTAWAAATAGAAHHN
NDDWTCTATTTWTAGYAACABN		 Transfac
Matys et al.(2006)
V$MEF2_04 		0.708 0.708
MEF2A
M10939_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2A_05 		0.708 0.708
MEF2A
M10940_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2A_Q6 		0.708 0.708
MEF2A
M10941_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2_Q6_02 		0.708 0.708
MEF2A
M10942_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MMEF2_Q6 		0.708 0.708
MEF2A
M10943_2.00 		Homo sapiens
NDKCTAWAAATAGMHH
DDKCTATTTWTAGMHN		 Transfac
Matys et al.(2006)
V$RSRFC4_01 		0.708 0.708
MEF2A
M10944_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RSRFC4_Q2 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshPB_pg.6__462 MADS box 10 58

Links

Other MADS box family TFs
Other Phycomyces blakesleeanus TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MEF2A Homo sapiens ENSG00000068305 D 0.828
estExt_fgeneshMC_pg.C_20010 Mucor circinelloides estExt_fgeneshMC_pg.C_20010 I 0.792
gw1.3.599.1 Phycomyces blakesleeanus gw1.3.599.1 I 0.792
estExt_fgeneshPB_pg.C_10863 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_10863 I 0.771
e_gw1.8.501.1 Mucor circinelloides e_gw1.8.501.1 I 0.771
RO3G_03857 Rhizopus oryzae RO3G_03857 I 0.771
e_gw1.10.299.1 Sporobolomyces roseus e_gw1.10.299.1 N 0.771
RO3G_15773 Rhizopus oryzae RO3G_15773 I 0.771
RHTO_02226 Rhodosporidium toruloides RHTO_02226 N 0.750
e_gw1.3.1235.1 Mucor circinelloides e_gw1.3.1235.1 I 0.750
RTG_02132 Rhodotorula glutinis RTG_02132 N 0.750
RO3G_02782 Rhizopus oryzae RO3G_02782 I 0.729
MVLG_02620 Microbotryum violaceum MVLG_02620 N 0.729
mef2aa Takifugu rubripes ENSTRUG00000007090 I 0.708
ENSXMAG00000003697 Xiphophorus maculatus ENSXMAG00000003697 I 0.708
ENSTSYG00000001620 Tarsius syrichta ENSTSYG00000001620 I 0.708
MEF2A Vicugna pacos ENSVPAG00000011436 I 0.708
MEF2A Tursiops truncatus ENSTTRG00000015831 I 0.708
ENSSSCG00000004815 Sus scrofa ENSSSCG00000004815 I 0.708
ENSSHAG00000016994 Sarcophilus harrisii ENSSHAG00000016994 I 0.708
Mef2a Rattus norvegicus ENSRNOG00000047756 I 0.708
MEF2A Pan troglodytes ENSPTRG00000007496 I 0.708
GLOINDRAFT_42742 Rhizophagus irregularis GLOINDRAFT_42742 I 0.708
ENSSSCG00000025724 Sus scrofa ENSSSCG00000025724 I 0.708
MEF2A Taeniopygia guttata ENSTGUG00000008733 I 0.708
ENSSTOG00000028856 Ictidomys tridecemlineatus ENSSTOG00000028856 I 0.708
ENSTNIG00000019230 Tetraodon nigroviridis ENSTNIG00000019230 I 0.708
ENSPSIG00000015011 Pelodiscus sinensis ENSPSIG00000015011 I 0.708
ENSP00000396219-D2 Bos grunniens ENSP00000396219-D2 I 0.708
ENSP00000284368 Macaca fascicularis ENSP00000284368 I 0.708
Gfo_R005864 Geospiza fortis Gfo_R005864 I 0.708
Tal_R009367 Tyto alba Tal_R009367 I 0.708
mef2a.L Xenopus laevis XB-GENE-487398 I 0.708
mef2a Xenopus tropicalis XB-GENE-487394 I 0.708
Aan_R008571 Calypte anna Aan_R008571 I 0.708
SEPMUDRAFT_148874 Sphaerulina musiva SEPMUDRAFT_148874 I 0.708
M437DRAFT_42083 Aureobasidium melanogenum M437DRAFT_42083 I 0.708
HelroG193589 Helobdella robusta HelroG193589 I 0.708
M438DRAFT_316511 Aureobasidium pullulans M438DRAFT_316511 I 0.708
MBM_03922 Marssonina brunnea MBM_03922 I 0.708
S40288_07194 Stachybotrys chartarum S40288_07194 I 0.708
Mycgr3G71585 Zymoseptoria tritici Mycgr3G71585 I 0.708
HelroG156791 Helobdella robusta HelroG156791 I 0.708
ENSPANG00000026183 Papio anubis ENSPANG00000026183 I 0.708
MEF2A Dasypus novemcinctus ENSDNOG00000018848 I 0.708
mef2aa Danio rerio ENSDARG00000031756 I 0.708
ENSCSAG00000016929 Chlorocebus sabaeus ENSCSAG00000016929 I 0.708
MEF2A Equus caballus ENSECAG00000011593 I 0.708
MEF2A Erinaceus europaeus ENSEEUG00000007138 I 0.708
MEF2A Felis catus ENSFCAG00000022495 I 0.708
ENSFALG00000010303 Ficedula albicollis ENSFALG00000010303 I 0.708
MEF2A Echinops telfairi ENSETEG00000018987 I 0.708
MEF2A Callithrix jacchus ENSCJAG00000017029 I 0.708
MEF2A Canis familiaris ENSCAFG00000010775 I 0.708
AOL_s00078g125 Arthrobotrys oligospora AOL_s00078g125 N 0.708
ACRE_047770 Acremonium chrysogenum ACRE_047770 I 0.708
RO3G_06615 Rhizopus oryzae RO3G_06615 I 0.708
DOTSEDRAFT_71657 Dothistroma septosporum DOTSEDRAFT_71657 I 0.708
E5Q_06057 Mixia osmundae E5Q_06057 N 0.708
MEF2A Bos taurus ENSBTAG00000010649 I 0.708
ENSAPLG00000007352 Anas platyrhynchos ENSAPLG00000007352 I 0.708
MEF2A Anolis carolinensis ENSACAG00000009923 I 0.708
mef2aa Gasterosteus aculeatus ENSGACG00000013182 I 0.708
ENSGALG00000007100 Gallus gallus ENSGALG00000007100 I 0.708
MEF2A Ornithorhynchus anatinus ENSOANG00000000143 I 0.708
ENSNLEG00000000911 Nomascus leucogenys ENSNLEG00000000911 I 0.708
Mef2a Mus musculus ENSMUSG00000030557 D 0.708
ENSOARG00000009878 Ovis aries ENSOARG00000009878 I 0.708
MEF2A Otolemur garnettii ENSOGAG00000008728 I 0.708
ENSPFOG00000019202 Poecilia formosa ENSPFOG00000019202 I 0.708
mef2aa Oryzias latipes ENSORLG00000008489 I 0.708
ENSONIG00000015126 Oreochromis niloticus ENSONIG00000015126 I 0.708
MEF2A Monodelphis domestica ENSMODG00000012725 I 0.708
MEF2A Macaca mulatta ENSMMUG00000018122 I 0.708
ENSLACG00000001355 Latimeria chalumnae ENSLACG00000001355 I 0.708
ENSGMOG00000015431 Gadus morhua ENSGMOG00000015431 I 0.708
MEF2A Gorilla gorilla ENSGGOG00000013064 I 0.708
MEF2A Loxodonta africana ENSLAFG00000004656 I 0.708
ENSLOCG00000014408 Lepisosteus oculatus ENSLOCG00000014408 I 0.708
MEF2A Myotis lucifugus ENSMLUG00000016420 I 0.708
MEF2A Meleagris gallopavo ENSMGAG00000009283 I 0.708
ENSMEUG00000013873 Macropus eugenii ENSMEUG00000013873 I 0.708
ENSPPYG00000006816 Pongo abelii ENSPPYG00000006816 I 0.708