Carubv10011303m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10011303m.g T257762_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10011303m MADS box 10 54

Links

Other MADS box family TFs
Other Capsella rubella TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0114s0045 Capsella grandiflora Cagra.0114s0045 N 1.000
Carubv10022252m.g Capsella rubella Carubv10022252m.g N 0.953
Cagra.2356s0007 Capsella grandiflora Cagra.2356s0007 N 0.930
Carubv10006189m.g Capsella rubella Carubv10006189m.g N 0.930
AGL87 Arabidopsis thaliana AT1G22590 N 0.907
Bostr.12659s0111 Boechera stricta Bostr.12659s0111 N 0.907
Carubv10021762m.g Capsella rubella Carubv10021762m.g N 0.907
Carubv10021360m.g Capsella rubella Carubv10021360m.g N 0.884
Carubv10021540m.g Capsella rubella Carubv10021540m.g N 0.884
Bo7g057820 Brassica oleracea Bo7g057820 N 0.837
Thhalv10008961m.g Eutrema salsugineum Thhalv10008961m.g N 0.822
Bo5g038690 Brassica oleracea Bo5g038690 N 0.814
Bra024521 Brassica rapa Bra024521 N 0.791
Bra012335 Brassica rapa Bra012335 N 0.756