CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_51.120
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_51.120
T258262_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_51.120
MADS box
10
58
LISNESTRKITFQKRKNGLMKKASELATLCGINMCMIIYSPYNTQLEVW
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.contig_36543
Carica papaya
evm.TU.contig_36543
I
0.958
evm.TU.contig_39415
Carica papaya
evm.TU.contig_39415
I
0.917
evm.TU.contig_40189
Carica papaya
evm.TU.contig_40189
I
0.917
evm.TU.supercontig_51.124
Carica papaya
evm.TU.supercontig_51.124
N
0.844
evm.TU.supercontig_1153.1
Carica papaya
evm.TU.supercontig_1153.1
N
0.787
evm.TU.supercontig_118.9
Carica papaya
evm.TU.supercontig_118.9
N
0.708