CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.010G096200
(
Gossypium raimondii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Gorai.010G096200
T258461_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.010G096200.1
MADS box
10
57
RLEDMKARQAKYSKRKKGILKKAKELSILCDVEVVLLLSSPSGKPTLF
Gorai.010G096200.2
MADS box
10
57
RLEDMKARQAKYSKRKKGILKKAKELSILCDVEVVLLLSSPSGKPTLF
Links
Other
MADS box
family TFs
Other
Gossypium raimondii
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.010G096100
Gossypium raimondii
Gorai.010G096100
N
0.875
Gorai.012G090000
Gossypium raimondii
Gorai.012G090000
N
0.833
Gorai.012G090200
Gossypium raimondii
Gorai.012G090200
N
0.833
Gorai.012G090600
Gossypium raimondii
Gorai.012G090600
N
0.833
Gorai.012G090100
Gossypium raimondii
Gorai.012G090100
N
0.812
Gorai.012G090300
Gossypium raimondii
Gorai.012G090300
N
0.812
AGL33
Populus trichocarpa
POPTR_0018s08400
N
0.750
TCM_037394
Theobroma cacao
TCM_037394
N
0.750
Bo8g068060
Brassica oleracea
Bo8g068060
I
0.708
Bo8g104060
Brassica oleracea
Bo8g104060
I
0.708
Bra016544
Brassica rapa
Bra016544
I
0.708
Bra031049
Brassica rapa
Bra031049
I
0.708
30138.m004061
Ricinus communis
30138.m004061
I
0.708
cassava19791.m1
Manihot esculenta
cassava19791.m1
I
0.708