CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000133671
(
Malus domestica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
MDP0000133671
T258648_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000133671
MADS box
10
58
YIQNHTTRKLTFKKRKKGFMKKMSEITTLCDVEACAIVYGQNDTQPEVW
Links
Other
MADS box
family TFs
Other
Malus domestica
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000236438
Malus domestica
MDP0000236438
N
0.958
MDP0000299637
Malus domestica
MDP0000299637
N
0.938
PRUPE_ppa018168mg
Prunus persica
PRUPE_ppa018168mg
I
0.733
Pm004396
Prunus mume
Pm004396
I
0.733
gene22967-v1.0-hybrid
Fragaria vesca
gene22967-v1.0-hybrid
I
0.708
Lus10032108.g
Linum usitatissimum
Lus10032108.g
I
0.708