CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g036058m.g
(
Citrus sinensis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
orange1.1g036058m.g
T258806_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g036058m
MADS box
10
57
KIENRTYRHITFAKRKSGLVKKAYEISTLCDVEVALIIFSPAGKLILF
Links
Other
MADS box
family TFs
Other
Citrus sinensis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.007G219600
Gossypium raimondii
Gorai.007G219600
N
0.938
TCM_000725
Theobroma cacao
TCM_000725
N
0.896
SapurV1A.1553s0010
Salix purpurea
SapurV1A.1553s0010
I
0.854
GSMUA_Achr8G12280_001
Musa acuminata
GSMUA_Achr8G12280_001
I
0.708
Thhalv10006419m.g
Eutrema salsugineum
Thhalv10006419m.g
I
0.708