SapurV1A.1553s0010 (Salix purpurea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 SapurV1A.1553s0010 T259068_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Solyc05g012020.2
M10986_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_01 		0.708 0.708
Solyc05g012020.2
M10987_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_Q2_01 		0.708 0.708
Solyc05g012020.2
M10988_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_Q2 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.1553s0010.1.p MADS box 10 57

Links

Other MADS box family TFs
Other Salix purpurea TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_000725 Theobroma cacao TCM_000725 N 0.854
orange1.1g036058m.g Citrus sinensis orange1.1g036058m.g N 0.854
Gorai.007G219600 Gossypium raimondii Gorai.007G219600 N 0.833
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.759
Bra014454 Brassica rapa Bra014454 I 0.729
Thhalv10006419m.g Eutrema salsugineum Thhalv10006419m.g I 0.729
ENSMICG00000005703 Microcebus murinus ENSMICG00000005703 I 0.711
Bo4g102530 Brassica oleracea Bo4g102530 I 0.708
GSMUA_Achr8G12280_001 Musa acuminata GSMUA_Achr8G12280_001 I 0.708
LPERR03G28970 Leersia perrieri LPERR03G28970 I 0.708
PGSC0003DMG400028359 Solanum tuberosum PGSC0003DMG400028359 I 0.708
POPTR_0003s16800 Populus trichocarpa POPTR_0003s16800 I 0.708
Solyc05g012020.2 Solanum lycopersicum Solyc05g012020.2 D 0.708
cassava32526.m1 Manihot esculenta cassava32526.m1 I 0.708
Aquca_013_00471 Aquilegia coerulea Aquca_013_00471 I 0.708
Ciclev10022568m.g Citrus clementina Ciclev10022568m.g I 0.708
Eucgr.E00516 Eucalyptus grandis Eucgr.E00516 I 0.708
Eucgr.G02427 Eucalyptus grandis Eucgr.G02427 I 0.708
evm.TU.supercontig_660.1 Carica papaya evm.TU.supercontig_660.1 I 0.708
orange1.1g027691m.g Citrus sinensis orange1.1g027691m.g I 0.708
Traes_4DL_008F8BBFA Triticum aestivum Traes_4DL_008F8BBFA I 0.705