SapurV1A.0025s0830 (Salix purpurea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 SapurV1A.0025s0830 T258985_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AP3
M08146_2.00 		Arabidopsis thaliana
WDCCMAAARWRGHAA
TTDCYWYTTTKGGHW		 ChIP-seq
Mathelier et al.(2014)
MA0556.1 		0.729 0.729
Q8VWZ4_MALDO
M11026_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS13_01 		0.729 0.729
AP3
M10919_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADSB_Q2 		0.729 0.729
Q40513_TOBAC
M11001_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DEF_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0025s0830.1.p MADS box 10 57

Links

Other MADS box family TFs
Other Salix purpurea TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AP3 Populus trichocarpa POPTR_0002s02990 I 0.917
PRUPE_ppa026083mg Prunus persica PRUPE_ppa026083mg I 0.771
Pm006266 Prunus mume Pm006266 I 0.771
Solyc02g084630.2 Solanum lycopersicum Solyc02g084630.2 I 0.750
POPTR_0005s12000 Populus trichocarpa POPTR_0005s12000 I 0.750
Solyc04g081000.2 Solanum lycopersicum Solyc04g081000.2 I 0.750
gene14896-v1.0-hybrid Fragaria vesca gene14896-v1.0-hybrid I 0.750
mgf015533m Mimulus guttatus mgf015533m I 0.750
Aquca_006_00072 Aquilegia coerulea Aquca_006_00072 I 0.750
Ciclev10026433m.g Citrus clementina Ciclev10026433m.g I 0.750
PGSC0003DMG400003709 Solanum tuberosum PGSC0003DMG400003709 I 0.750
Gorai.003G011500 Gossypium raimondii Gorai.003G011500 I 0.750
Lus10010630.g Linum usitatissimum Lus10010630.g I 0.750
PGSC0003DMG400003541 Solanum tuberosum PGSC0003DMG400003541 I 0.750
SapurV1A.2002s0050 Salix purpurea SapurV1A.2002s0050 I 0.750
Lus10031960.g Linum usitatissimum Lus10031960.g I 0.750
SapurV1A.0569s0080 Salix purpurea SapurV1A.0569s0080 I 0.729
Carubv10018833m.g Capsella rubella Carubv10018833m.g I 0.729
Cagra.0562s0025 Capsella grandiflora Cagra.0562s0025 I 0.729
Bostr.0697s0046 Boechera stricta Bostr.0697s0046 I 0.729
mgf000046m Mimulus guttatus mgf000046m I 0.729
chr1.CM0195.210.nc Lotus japonicus chr1.CM0195.210.nc I 0.729
Q8VWZ4_MALDO Malus domestica Q8VWZ4_MALDO D 0.729
Cucsa.342790 Cucumis sativus Cucsa.342790 I 0.729
Eucgr.I02376 Eucalyptus grandis Eucgr.I02376 I 0.729
Gorai.009G271100 Gossypium raimondii Gorai.009G271100 I 0.729
cassava41235.m1 Manihot esculenta cassava41235.m1 I 0.729
Lus10033187.g Linum usitatissimum Lus10033187.g I 0.729
MDP0000133037 Malus domestica MDP0000133037 I 0.729
MDP0000184294 Malus domestica MDP0000184294 I 0.729
orange1.1g027470m.g Citrus sinensis orange1.1g027470m.g I 0.729
MDP0000315938 Malus domestica MDP0000315938 I 0.729
MDP0000224779 Malus domestica MDP0000224779 I 0.729
Eucgr.F01615 Eucalyptus grandis Eucgr.F01615 I 0.729
cassava37822.valid.m1 Manihot esculenta cassava37822.valid.m1 I 0.729
Ca_04909 Cicer arietinum Ca_04909 I 0.729
PRUPE_ppa010727mg Prunus persica PRUPE_ppa010727mg I 0.729
GLYMA06G02990 Glycine max GLYMA06G02990 I 0.729
AP3 Vitis vinifera VIT_18s0001g13460 I 0.729
AP3 Arabidopsis lyrata fgenesh2_kg.5__1825__AT3G54340.1 I 0.729
AP3 Arabidopsis thaliana AT3G54340 D 0.729
Cla021117 Citrullus lanatus Cla021117 I 0.729
POPTR_0007s13660 Populus trichocarpa POPTR_0007s13660 I 0.729
cassava37821.valid.m1 Manihot esculenta cassava37821.valid.m1 I 0.729
cassava33649.m1 Manihot esculenta cassava33649.m1 I 0.729
MTR_3g113030 Medicago truncatula MTR_3g113030 I 0.729
VIT_04s0023g02820 Vitis vinifera VIT_04s0023g02820 I 0.729
GLYMA01G37470 Glycine max GLYMA01G37470 I 0.708
GLYMA04G02980 Glycine max GLYMA04G02980 I 0.708
SapurV1A.0396s0210 Salix purpurea SapurV1A.0396s0210 I 0.708
Bo4g120010 Brassica oleracea Bo4g120010 I 0.708
chr2.CM0249.370.nd Lotus japonicus chr2.CM0249.370.nd I 0.708
Thhalv10010683m.g Eutrema salsugineum Thhalv10010683m.g I 0.708
Bo8g083600 Brassica oleracea Bo8g083600 I 0.708
Bra014822 Brassica rapa Bra014822 I 0.708
Bra007067 Brassica rapa Bra007067 I 0.708
orange1.1g040046m.g Citrus sinensis orange1.1g040046m.g I 0.708
Gorai.008G064900 Gossypium raimondii Gorai.008G064900 I 0.708
Pm026712 Prunus mume Pm026712 I 0.708
Q40513_TOBAC Nicotiana tabacum Q40513_TOBAC D 0.708
29782.m000119 Ricinus communis 29782.m000119 I 0.708
cassava21176.m1 Manihot esculenta cassava21176.m1 I 0.708
Ciclev10002410m.g Citrus clementina Ciclev10002410m.g I 0.708
Ca_01994 Cicer arietinum Ca_01994 I 0.708
MTR_5g021270 Medicago truncatula MTR_5g021270 I 0.708
TCM_000266 Theobroma cacao TCM_000266 I 0.708
evm.TU.supercontig_6.202 Carica papaya evm.TU.supercontig_6.202 I 0.708
evm.TU.supercontig_6.199 Carica papaya evm.TU.supercontig_6.199 I 0.708
GLYMA11G07820 Glycine max GLYMA11G07820 I 0.708