CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0252s0210
(
Salix purpurea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
SapurV1A.0252s0210
T259017_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0252s0210.1.p
MADS box
10
54
LIRKEKSRMLTFRKRKAGLLKKASEFSILCGVDACVIIFGPKLKD
Links
Other
MADS box
family TFs
Other
Salix purpurea
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0002s25700
Populus trichocarpa
POPTR_0002s25700
N
0.978
POPTR_0012s11170
Populus trichocarpa
POPTR_0012s11170
N
0.978
POPTR_0001s33740
Populus trichocarpa
POPTR_0001s33740
N
0.800
cassava35040.m1
Manihot esculenta
cassava35040.m1
N
0.778
SapurV1A.0278s0250
Salix purpurea
SapurV1A.0278s0250
N
0.761
30190.m010925
Ricinus communis
30190.m010925
N
0.711