CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10019758m.g
(
Eutrema salsugineum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Thhalv10019758m.g
T259163_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10019758m
MADS box
10
57
FIEKSSSSKKTFQKRKKGILKKVKEISTLCGVTACAIIYSPYTSNPDV
Links
Other
MADS box
family TFs
Other
Eutrema salsugineum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10019579m.g
Eutrema salsugineum
Thhalv10019579m.g
I
0.915
Thhalv10002346m.g
Eutrema salsugineum
Thhalv10002346m.g
I
0.915
Thhalv10019451m.g
Eutrema salsugineum
Thhalv10019451m.g
I
0.915
Thhalv10019751m.g
Eutrema salsugineum
Thhalv10019751m.g
I
0.915
Thhalv10019681m.g
Eutrema salsugineum
Thhalv10019681m.g
I
0.911
Thhalv10002350m.g
Eutrema salsugineum
Thhalv10002350m.g
I
0.911
Thhalv10019833m.g
Eutrema salsugineum
Thhalv10019833m.g
I
0.894
Thhalv10019516m.g
Eutrema salsugineum
Thhalv10019516m.g
I
0.894
Thhalv10002349m.g
Eutrema salsugineum
Thhalv10002349m.g
I
0.894
Thhalv10019449m.g
Eutrema salsugineum
Thhalv10019449m.g
I
0.872
Thhalv10019810m.g
Eutrema salsugineum
Thhalv10019810m.g
I
0.872
Thhalv10002353m.g
Eutrema salsugineum
Thhalv10002353m.g
I
0.841
Thhalv10002352m.g
Eutrema salsugineum
Thhalv10002352m.g
I
0.841
Thhalv10019731m.g
Eutrema salsugineum
Thhalv10019731m.g
I
0.833
LjSGA_104570.1
Lotus japonicus
LjSGA_104570.1
I
0.759
Thhalv10002789m.g
Eutrema salsugineum
Thhalv10002789m.g
I
0.739
Thhalv10002956m.g
Eutrema salsugineum
Thhalv10002956m.g
I
0.733
Thhalv10002996m.g
Eutrema salsugineum
Thhalv10002996m.g
I
0.733
Thhalv10024162m.g
Eutrema salsugineum
Thhalv10024162m.g
I
0.729
Thhalv10022373m.g
Eutrema salsugineum
Thhalv10022373m.g
I
0.708
Thhalv10023873m.g
Eutrema salsugineum
Thhalv10023873m.g
I
0.708
Thhalv10024119m.g
Eutrema salsugineum
Thhalv10024119m.g
I
0.708