CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MBD5
(
Arabidopsis thaliana
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
AT3G46580
T259896_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G46580.1
MBD
25
137
KRATPGDDNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGTPKKKSVKTAENGDSHSEHSEGRGSARRQTKSNKKVTEPPPKPLNFDFLNVPEKVT
Links
Other
MBD
family TFs
Other
Arabidopsis thaliana
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MBD05
Arabidopsis lyrata
fgenesh2_kg.5__1020__AT3G46580.1
N
0.974
Bostr.18473s0301
Boechera stricta
Bostr.18473s0301
N
0.961
Cagra.0448s0007
Capsella grandiflora
Cagra.0448s0007
N
0.844
Carubv10018084m.g
Capsella rubella
Carubv10018084m.g
N
0.844
Thhalv10002683m.g
Eutrema salsugineum
Thhalv10002683m.g
N
0.818
Bra033814
Brassica rapa
Bra033814
N
0.779
Bo1g070790
Brassica oleracea
Bo1g070790
N
0.766
Bo9g139330
Brassica oleracea
Bo9g139330
N
0.727
Bra002571
Brassica rapa
Bra002571
N
0.727
Thhalv10014530m.g
Eutrema salsugineum
Thhalv10014530m.g
N
0.727