CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.18473s0301
(
Boechera stricta
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Bostr.18473s0301
T261432_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.18473s0301.1.p
MBD
25
136
KRATPGDDNWLPPDWRTEVRVRTSGTKAGVVDKFYYEPITGRKFRSKNEVLYYLEHGTPKKANKKAENGDLHSEHSEGRGSNRRQTKSNKKSNEPPPKPVNFDFLNVPEKVT
Links
Other
MBD
family TFs
Other
Boechera stricta
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MBD5
Arabidopsis thaliana
AT3G46580
N
0.961
MBD05
Arabidopsis lyrata
fgenesh2_kg.5__1020__AT3G46580.1
N
0.961
Cagra.0448s0007
Capsella grandiflora
Cagra.0448s0007
N
0.857
Carubv10018084m.g
Capsella rubella
Carubv10018084m.g
N
0.857
Thhalv10002683m.g
Eutrema salsugineum
Thhalv10002683m.g
N
0.805
Bra033814
Brassica rapa
Bra033814
N
0.766
Bo1g070790
Brassica oleracea
Bo1g070790
N
0.753
Bo9g139330
Brassica oleracea
Bo9g139330
N
0.714
Bra002571
Brassica rapa
Bra002571
N
0.714
Thhalv10014530m.g
Eutrema salsugineum
Thhalv10014530m.g
N
0.714