CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA04G02840
(
Oryza nivara
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ONIVA04G02840
T260790_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA04G02840.1
MBD
33
95
DDVDDRPGWLPDGWIMEVYLGDDGTIYRYYICPVSGRTFTMKSEVLHYLFSEMDQCFTESKNR
ONIVA04G02840.1
MBD
99
170
SNLTRTHEWLPKGWLVEIRAGGDNMDKMYKFYVYPPNRVRLFSKDDVLLYIKEMKISGFDTDGQCNTSTQEN
ONIVA04G02840.1
MBD
178
288
NPEGLPQGWVKEVVFRKTHTGRIRRDRHYTDPIKSYVFRTKRSAALYVETGKVTIRAFVQKTSVHEVYSFEKFTHLHESLQKRLNLGRTNQLRTRSSKLQKLSLKEGILSD
Links
Other
MBD
family TFs
Other
Oryza nivara
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI04G03540
Oryza meridionalis
OMERI04G03540
N
1.000
OBART04G03670
Oryza barthii
OBART04G03670
N
0.995
ORGLA04G0027100
Oryza glaberrima
ORGLA04G0027100
N
0.971
BGIOSGA040484
Oryza indica
BGIOSGA040484
N
0.965
OGLUM04G03020
Oryza glumaepatula
OGLUM04G03020
N
0.901
OBART04G03630
Oryza barthii
OBART04G03630
N
0.896
ORUFI04G04290
Oryza rufipogon
ORUFI04G04290
N
0.851
ORGLA04G0026900
Oryza glaberrima
ORGLA04G0026900
N
0.832
ORUFI04G04300
Oryza rufipogon
ORUFI04G04300
N
0.807
OS04G0193200
Oryza sativa
OS04G0193200
N
0.806
ONIVA04G02810
Oryza nivara
ONIVA04G02810
N
0.771
OGLUM04G03070
Oryza glumaepatula
OGLUM04G03070
N
0.756
OBART04G03640
Oryza barthii
OBART04G03640
N
0.745
OGLUM04G03030
Oryza glumaepatula
OGLUM04G03030
N
0.721
OPUNC04G03390
Oryza punctata
OPUNC04G03390
N
0.701