ORUFI04G04300 (Oryza rufipogon)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 ORUFI04G04300 T260825_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI04G04300.1 MBD 34 92
ORUFI04G04300.1 MBD 85 143
ORUFI04G04300.1 MBD 144 258
ORUFI04G04300.1 MBD 412 474
ORUFI04G04300.1 MBD 478 548
ORUFI04G04300.1 MBD 558 665
ORUFI04G04300.2 MBD 34 92
ORUFI04G04300.2 MBD 85 143
ORUFI04G04300.2 MBD 144 258
ORUFI04G04300.2 MBD 399 461
ORUFI04G04300.2 MBD 465 535
ORUFI04G04300.2 MBD 545 652
ORUFI04G04300.3 MBD 34 92
ORUFI04G04300.3 MBD 85 143
ORUFI04G04300.3 MBD 144 259
ORUFI04G04300.3 MBD 399 461
ORUFI04G04300.3 MBD 465 535
ORUFI04G04300.3 MBD 545 652
ORUFI04G04300.4 MBD 34 92
ORUFI04G04300.4 MBD 85 143
ORUFI04G04300.4 MBD 144 260

Links

Other MBD family TFs
Other Oryza rufipogon TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA04G02810 Oryza nivara ONIVA04G02810 N 0.851
OMERI04G03540 Oryza meridionalis OMERI04G03540 N 0.812
ORGLA04G0026900 Oryza glaberrima ORGLA04G0026900 N 0.812
ONIVA04G02840 Oryza nivara ONIVA04G02840 N 0.807
OBART04G03640 Oryza barthii OBART04G03640 N 0.806
OBART04G03670 Oryza barthii OBART04G03670 N 0.802
ORGLA04G0027100 Oryza glaberrima ORGLA04G0027100 N 0.802
OS04G0193200 Oryza sativa OS04G0193200 N 0.790
BGIOSGA040484 Oryza indica BGIOSGA040484 N 0.788
OBART04G03630 Oryza barthii OBART04G03630 N 0.780
OGLUM04G03020 Oryza glumaepatula OGLUM04G03020 N 0.776
OGLUM04G03030 Oryza glumaepatula OGLUM04G03030 N 0.706