CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA04G0222000
(
Oryza glaberrima
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ORGLA04G0222000
T260815_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA04G0222000.1
MBD
28
173
IEPAGEGLPHGWLKEYRPRKNQSGSRVKGDTFYIDPTNMYEFRSQKDVQRYLESGDVTNCVMIQNKRKMEDLHTARNQSHHTRRPSDHRQLDAGEGATQCDLPIARGNSARSDFLVNANSSDNSEDISSSVPKGVSEGKLTRLKLQ
Links
Other
MBD
family TFs
Other
Oryza glaberrima
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS04G0613800
Oryza sativa
OS04G0613800
N
0.981
ORUFI04G26780
Oryza rufipogon
ORUFI04G26780
N
0.957
LPERR04G20690
Leersia perrieri
LPERR04G20690
N
0.847
BGIOSGA014360
Oryza indica
BGIOSGA014360
N
0.818
OBART04G25580
Oryza barthii
OBART04G25580
N
0.818
OGLUM04G25040
Oryza glumaepatula
OGLUM04G25040
N
0.818
OLONG_021241
Oryza longistaminata
OLONG_021241
N
0.818
OMERI04G20820
Oryza meridionalis
OMERI04G20820
N
0.818
ONIVA04G24220
Oryza nivara
ONIVA04G24220
N
0.818
OPUNC04G22620
Oryza punctata
OPUNC04G22620
N
0.746
OB04G32040
Oryza brachyantha
OB04G32040
N
0.742
Sb06g028360
Sorghum bicolor
Sb06g028360
N
0.712
Traes_2AL_25E8FB175
Triticum aestivum
Traes_2AL_25E8FB175
N
0.712