CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS04G0613800
(
Oryza sativa
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
OS04G0613800
T260840_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS04T0613800-01
MBD
28
161
IEPAGEGLPHGWLKEYRPRKNQSGSRVKGDTFYIDPTNMYEFRSQKDVQRYLESGDVTNCVMIQNKRKMEDLHTARNQSHHTRRPSDHRQLDAGEGATQCDLPIARGNSARSDFLVNANSSDNSEDMSSSVPKG
OS04T0613800-02
MBD
28
161
IEPAGEGLPHGWLKEYRPRKNQSGSRVKGDTFYIDPTNMYEFRSQKDVQRYLESGDVTNCVMIQNKRKMEDLHTARNQSHHTRRPSDHRQLDAGEGATQCDLPIARGNSARSDFLVNANSSDNSEDMSSSVPKG
OS04T0613800-03
MBD
1
133
EYRPRKNQSGSRVKGDTFYIDPTNMYEFRSQKDVQRYLESGDVTNCVMIQNKRKMEDLHTARNQSHHTRRPSDHRQLDAGEGATQCDLPIARGNSARSDFLVNANSSDNSEDMSSSVPKGVSEGKLTRLKLQK
Links
Other
MBD
family TFs
Other
Oryza sativa
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA014360
Oryza indica
BGIOSGA014360
N
1.000
OBART04G25580
Oryza barthii
OBART04G25580
N
1.000
OGLUM04G25040
Oryza glumaepatula
OGLUM04G25040
N
1.000
OLONG_021241
Oryza longistaminata
OLONG_021241
N
1.000
OMERI04G20820
Oryza meridionalis
OMERI04G20820
N
1.000
ONIVA04G24220
Oryza nivara
ONIVA04G24220
N
1.000
ORUFI04G26780
Oryza rufipogon
ORUFI04G26780
N
1.000
ORGLA04G0222000
Oryza glaberrima
ORGLA04G0222000
N
0.981
LPERR04G20690
Leersia perrieri
LPERR04G20690
N
0.814
Sb06g028360
Sorghum bicolor
Sb06g028360
N
0.765
OPUNC04G22620
Oryza punctata
OPUNC04G22620
N
0.746