CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo1g057760
(
Brassica oleracea
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bo1g057760
T262120_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo1g057760.1
mTERF
174
377
LTDSAADTKKLRAVSRVSELDTEGALRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSLEGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIIYRFPAILTYSRQKLISTVDFLTQTGLSEEQIGKILTRCPNIMSYSVEDKLRPTMEYFKSLNVDVAVLLHRCPQTFGLSIETNLKP
Bo1g057760.1
mTERF
352
471
LNVDVAVLLHRCPQTFGLSIETNLKPVTEFFLQKGYGIDEIGIMISRYGALYTFSLRENLMPKWDYFQTMDYPKSELVKFPQFFGYSLQERIKPRYELVKRSRVTLLLNQVLSLSGVEFE
Links
Other
mTERF
family TFs
Other
Brassica oleracea
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra036876
Brassica rapa
Bra036876
N
0.984
Cagra.1718s0021
Capsella grandiflora
Cagra.1718s0021
N
0.940
Carubv10007049m.g
Capsella rubella
Carubv10007049m.g
N
0.931