CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra036876
(
Brassica rapa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bra036876
T262212_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra036876.1-P
mTERF
174
377
LTDSAADSKKLRAVSRVSELDTEGALRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSLEGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIIYRFPAILTYSRQKLISTVEFLTQTGLSEEQIGKILTRCPNIMSYSVEDKLRPTMEYFKSLNVDVAVLLHRCPQTFGLSIETNLKP
Bra036876.1-P
mTERF
352
471
LNVDVAVLLHRCPQTFGLSIETNLKPVTEFFLEKGYGIDEIGIMISRYGALYTFSLRENLMPKWDYFQTMDYPKSELVKFPQFFGYSLQERIKPRYELVKRSGVRLLLNQVLSLSGVEFE
Links
Other
mTERF
family TFs
Other
Brassica rapa
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo1g057760
Brassica oleracea
Bo1g057760
N
0.984
Cagra.1718s0021
Capsella grandiflora
Cagra.1718s0021
N
0.941
Carubv10007049m.g
Capsella rubella
Carubv10007049m.g
N
0.934