CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra004800
(
Brassica rapa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bra004800
T262172_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra004800.1-P
mTERF
9
82
IQGKKEKLVNRVKVCDHLKTLGVITDELETIELPSTLEVISERLEFLHKLGLTIDDVNEYPLMLGCSVRKNLIP
Bra004800.1-P
mTERF
84
392
LAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRAYVIGYSLEETVKPNVECLISFGVRREMLPLVIAQYPQILGLPVKAKMSTQQYFFSLKLKVDPEGFARVVEKMPQVVSLKQNVIMKPVEFLLGRGFRVEDVARMVVRCPQILCSRVELMKNGYYFYKTEMGRPMKELVEYPEYFTYGLESRIKPRYQKLQGKGIRSSLNWFLNCSDQRFE
Links
Other
mTERF
family TFs
Other
Brassica rapa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo4g021230
Brassica oleracea
Bo4g021230
N
0.830
scaffold_403309.1
Arabidopsis lyrata
scaffold_403309.1
N
0.790
AT2G44020
Arabidopsis thaliana
AT2G44020
N
0.787
Cagra.1517s0032
Capsella grandiflora
Cagra.1517s0032
N
0.782
Carubv10023033m.g
Capsella rubella
Carubv10023033m.g
N
0.782
Thhalv10001406m.g
Eutrema salsugineum
Thhalv10001406m.g
N
0.774
Bostr.25993s0368
Boechera stricta
Bostr.25993s0368
N
0.766
evm.TU.supercontig_151.12
Carica papaya
evm.TU.supercontig_151.12
N
0.713