Carubv10023033m.g (Capsella rubella)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 Carubv10023033m.g T264668_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10023033m mTERF 72 147
Carubv10023033m mTERF 149 457

Links

Other mTERF family TFs
Other Capsella rubella TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1517s0032 Capsella grandiflora Cagra.1517s0032 N 1.000
scaffold_403309.1 Arabidopsis lyrata scaffold_403309.1 N 0.976
AT2G44020 Arabidopsis thaliana AT2G44020 N 0.974
Thhalv10001406m.g Eutrema salsugineum Thhalv10001406m.g N 0.971
Bo4g021230 Brassica oleracea Bo4g021230 N 0.924
Bostr.25993s0368 Boechera stricta Bostr.25993s0368 N 0.885
evm.TU.supercontig_151.12 Carica papaya evm.TU.supercontig_151.12 N 0.879
SapurV1A.0179s0360 Salix purpurea SapurV1A.0179s0360 N 0.849
SapurV1A.0596s0020 Salix purpurea SapurV1A.0596s0020 N 0.847
POPTR_0013s12100 Populus trichocarpa POPTR_0013s12100 N 0.845
TCM_001393 Theobroma cacao TCM_001393 N 0.839
Ca_10412 Cicer arietinum Ca_10412 N 0.839
Ciclev10000930m.g Citrus clementina Ciclev10000930m.g N 0.832
orange1.1g048759m.g Citrus sinensis orange1.1g048759m.g N 0.830
Gorai.003G090600 Gossypium raimondii Gorai.003G090600 N 0.829
PK11431.1 Cannabis sativa PK11431.1 N 0.822
Cla017427 Citrullus lanatus Cla017427 N 0.818
mgf008193m Mimulus guttatus mgf008193m N 0.812
Aquca_009_00307 Aquilegia coerulea Aquca_009_00307 N 0.795
SapurV1A.0287s0020 Salix purpurea SapurV1A.0287s0020 N 0.792
Bra004800 Brassica rapa Bra004800 N 0.782
cassava22183.valid.m1 Manihot esculenta cassava22183.valid.m1 N 0.758
chr4.CM0042.1400.nc Lotus japonicus chr4.CM0042.1400.nc N 0.715
Eucgr.F02687 Eucalyptus grandis Eucgr.F02687 N 0.713
PRUPE_ppa005819mg Prunus persica PRUPE_ppa005819mg N 0.705