CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK11431.1
(
Cannabis sativa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
PK11431.1
T265255_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK11431.1
mTERF
67
149
EMPSVTWGVVQGRKEKLVSRVIICDYLKSLGIITDELESLELPSTVEVMRERVEFIMRLGLTVDDINEYPLMLGCSVRKNLIP
PK11431.1
mTERF
151
459
LGYLEKIGIQRSKLGEFVKNYPQVLHASVVVELAPVIKSLRGLDVEKEDIGYVLMKYPEILGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIKPLVDYLVSLGLPKKILSRMLEKRAYILGYDLDETVKPNVECLLSFGVRKESLASVIAQYPQIIGLPLKAKMSSQQYFFNLKLKVDPEGFARVMEKMPQIISLNQNVILKPVEFLLGRGLPTGDVAKMVVKCPQLVALRVDRMKNSYYFFKSEMGRPLQELVEFPEYFTYSLESRIKPRYNRLQNKGIRTSLNWFLNCSDQRFE
Links
Other
mTERF
family TFs
Other
Cannabis sativa
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_10412
Cicer arietinum
Ca_10412
N
0.847
TCM_001393
Theobroma cacao
TCM_001393
N
0.846
evm.TU.supercontig_151.12
Carica papaya
evm.TU.supercontig_151.12
N
0.841
POPTR_0013s12100
Populus trichocarpa
POPTR_0013s12100
N
0.833
Ciclev10000930m.g
Citrus clementina
Ciclev10000930m.g
N
0.830
orange1.1g048759m.g
Citrus sinensis
orange1.1g048759m.g
N
0.830
Cla017427
Citrullus lanatus
Cla017427
N
0.828
Gorai.003G090600
Gossypium raimondii
Gorai.003G090600
N
0.825
Cagra.1517s0032
Capsella grandiflora
Cagra.1517s0032
N
0.822
Carubv10023033m.g
Capsella rubella
Carubv10023033m.g
N
0.822
SapurV1A.0596s0020
Salix purpurea
SapurV1A.0596s0020
N
0.822
SapurV1A.0179s0360
Salix purpurea
SapurV1A.0179s0360
N
0.820
Thhalv10001406m.g
Eutrema salsugineum
Thhalv10001406m.g
N
0.816
scaffold_403309.1
Arabidopsis lyrata
scaffold_403309.1
N
0.815
AT2G44020
Arabidopsis thaliana
AT2G44020
N
0.812
mgf008193m
Mimulus guttatus
mgf008193m
N
0.809
Aquca_009_00307
Aquilegia coerulea
Aquca_009_00307
N
0.809
Bo4g021230
Brassica oleracea
Bo4g021230
N
0.799
SapurV1A.0287s0020
Salix purpurea
SapurV1A.0287s0020
N
0.799
cassava22183.valid.m1
Manihot esculenta
cassava22183.valid.m1
N
0.755
Bostr.25993s0368
Boechera stricta
Bostr.25993s0368
N
0.746
Eucgr.F02687
Eucalyptus grandis
Eucgr.F02687
N
0.729