CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_001393
(
Theobroma cacao
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
TCM_001393
T263691_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOX92445
mTERF
70
144
VVQGKKEKLVNRVKICDYLKTLGIIPDELENLELPSTVEVMSGRVEFLQKLGLTIDDINEYPFMLGCSLRKNMIP
EOX92445
mTERF
146
454
LGYLEKIGIPKSKLGEFVKNYPQVLHASVVVELAPVIKFLRGLDVEKQDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYFLGMRVGTMIKPLVDYLVSLGLPKKILARMLEKRAYLLGYDLEETVKPNVDCLISFGMRREAIASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGFARVIEKMPQIASLNQHVLMKPIEFLLGRGLPLEDVAKMVMKCPQLVALRVEHMKRSYYYFKSEMGRPVKELVEFPEYFTYSLESRIKPRYLKLQNKGIRCSLNWFLNCSDQRFE
Links
Other
mTERF
family TFs
Other
Theobroma cacao
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.003G090600
Gossypium raimondii
Gorai.003G090600
N
0.942
evm.TU.supercontig_151.12
Carica papaya
evm.TU.supercontig_151.12
N
0.876
POPTR_0013s12100
Populus trichocarpa
POPTR_0013s12100
N
0.863
Ciclev10000930m.g
Citrus clementina
Ciclev10000930m.g
N
0.861
orange1.1g048759m.g
Citrus sinensis
orange1.1g048759m.g
N
0.861
SapurV1A.0596s0020
Salix purpurea
SapurV1A.0596s0020
N
0.852
Ca_10412
Cicer arietinum
Ca_10412
N
0.850
SapurV1A.0179s0360
Salix purpurea
SapurV1A.0179s0360
N
0.850
PK11431.1
Cannabis sativa
PK11431.1
N
0.846
Cla017427
Citrullus lanatus
Cla017427
N
0.839
Cagra.1517s0032
Capsella grandiflora
Cagra.1517s0032
N
0.839
Carubv10023033m.g
Capsella rubella
Carubv10023033m.g
N
0.839
scaffold_403309.1
Arabidopsis lyrata
scaffold_403309.1
N
0.836
AT2G44020
Arabidopsis thaliana
AT2G44020
N
0.834
Aquca_009_00307
Aquilegia coerulea
Aquca_009_00307
N
0.834
Thhalv10001406m.g
Eutrema salsugineum
Thhalv10001406m.g
N
0.829
SapurV1A.0287s0020
Salix purpurea
SapurV1A.0287s0020
N
0.823
Bo4g021230
Brassica oleracea
Bo4g021230
N
0.818
mgf008193m
Mimulus guttatus
mgf008193m
N
0.818
cassava22183.valid.m1
Manihot esculenta
cassava22183.valid.m1
N
0.784
Bostr.25993s0368
Boechera stricta
Bostr.25993s0368
N
0.751
Eucgr.F02687
Eucalyptus grandis
Eucgr.F02687
N
0.737
PRUPE_ppa005819mg
Prunus persica
PRUPE_ppa005819mg
N
0.727
VIT_11s0016g02240
Vitis vinifera
VIT_11s0016g02240
N
0.715
Pm022294
Prunus mume
Pm022294
N
0.712
MTR_1g115415
Medicago truncatula
MTR_1g115415
N
0.704