CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_1g115415
(
Medicago truncatula
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
MTR_1g115415
T262950_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH44486
mTERF
69
141
QGRKEKLVSRVIIFDYLKGLGIIPDELQDLELPSTVEVMRERVEFIQKLGLTIDDINQYPLILGCSVRKNMIP
KEH44486
mTERF
143
451
LGYLEKIGISRSKLGEFIKNYPQVLHASVIVELAPVIKFLRGLDVEKDDIGFVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIKPLVDYLVNLGLPKRILARMLEKRAYLLGYDLEETVKPNVDCLISFGLRKEYLPSVIAQYPLIIGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLHQNVIMKPVEFLLGRAIPSQDVASMVIKCPQLVALRVELMKNSYYFFKSEMGRPVKELVEFPEYFTYSLESRIKPRYQRLKTKGIKCSLNWMLNCSDQRFE
Links
Other
mTERF
family TFs
Other
Medicago truncatula
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr4.CM0042.1400.nc
Lotus japonicus
chr4.CM0042.1400.nc
N
0.900
GLYMA08G05110
Glycine max
GLYMA08G05110
N
0.878
Eucgr.F02687
Eucalyptus grandis
Eucgr.F02687
N
0.859
PRUPE_ppa005819mg
Prunus persica
PRUPE_ppa005819mg
N
0.857
Pm022294
Prunus mume
Pm022294
N
0.854
Cucsa.340350
Cucumis sativus
Cucsa.340350
N
0.851
VIT_11s0016g02240
Vitis vinifera
VIT_11s0016g02240
N
0.838
PGSC0003DMG400009215
Solanum tuberosum
PGSC0003DMG400009215
N
0.832
Solyc11g017050.1
Solanum lycopersicum
Solyc11g017050.1
N
0.830
SapurV1A.1095s0110
Salix purpurea
SapurV1A.1095s0110
N
0.811
AMTR_s00010p00234800
Amborella trichopoda
AMTR_s00010p00234800
N
0.805
Lus10004614.g
Linum usitatissimum
Lus10004614.g
N
0.795
Ca_10412
Cicer arietinum
Ca_10412
N
0.783
Bostr.25993s0368
Boechera stricta
Bostr.25993s0368
N
0.754
Cla017427
Citrullus lanatus
Cla017427
N
0.719
POPTR_0013s12100
Populus trichocarpa
POPTR_0013s12100
N
0.716
evm.TU.supercontig_151.12
Carica papaya
evm.TU.supercontig_151.12
N
0.714
SapurV1A.0596s0020
Salix purpurea
SapurV1A.0596s0020
N
0.714
cassava22183.valid.m1
Manihot esculenta
cassava22183.valid.m1
N
0.711
TCM_001393
Theobroma cacao
TCM_001393
N
0.704
Gorai.003G090600
Gossypium raimondii
Gorai.003G090600
N
0.703