CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc11g017050.1
(
Solanum lycopersicum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Solyc11g017050.1
T263675_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc11g017050.1.1
mTERF
65
138
VQGRKEKLVSRVIISDYLRSIGVIPDELEELELPSTVEVMRERVEFLQKIGLTVDDMNEYPLMLGCSVRKNIIP
Solyc11g017050.1.1
mTERF
140
448
LTYLEKIGLQRSKLGEFIKIYPQCLHTSVVVELVPVIKFLRGLDVEKQDIGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVNPRDVGPMVTQYPYFLGMRVGTTIKPLVDYLVSLGVPKKILARMLEKRAYLLGYDLEETVKPNVNCLLSFGLKKDTLPSVIAQFPQILGLPLKAKLSSQQYFFNLKLKIDPDGFARVIEKMPQIVSLHQHVIMKPVEFLVGRGFSTADVAKMIVKCPQLVALQVGLMKNSYYFFKSDMGRPMEELLDFPDYFTYSLESRIKPRYQRLQNKGMRCSLGWFLNCSDQRFE
Links
Other
mTERF
family TFs
Other
Solanum lycopersicum
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400009215
Solanum tuberosum
PGSC0003DMG400009215
N
0.978
PRUPE_ppa005819mg
Prunus persica
PRUPE_ppa005819mg
N
0.841
Eucgr.F02687
Eucalyptus grandis
Eucgr.F02687
N
0.840
Pm022294
Prunus mume
Pm022294
N
0.838
MTR_1g115415
Medicago truncatula
MTR_1g115415
N
0.830
Cucsa.340350
Cucumis sativus
Cucsa.340350
N
0.822
chr4.CM0042.1400.nc
Lotus japonicus
chr4.CM0042.1400.nc
N
0.821
VIT_11s0016g02240
Vitis vinifera
VIT_11s0016g02240
N
0.815
GLYMA08G05110
Glycine max
GLYMA08G05110
N
0.813
AMTR_s00010p00234800
Amborella trichopoda
AMTR_s00010p00234800
N
0.791
SapurV1A.1095s0110
Salix purpurea
SapurV1A.1095s0110
N
0.783
Lus10004614.g
Linum usitatissimum
Lus10004614.g
N
0.757
Bostr.25993s0368
Boechera stricta
Bostr.25993s0368
N
0.719