CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bra014385
(
Brassica rapa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bra014385
T262182_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra014385.1-P
mTERF
94
258
LALLKTNGFTFEQITRVVNSFPSILIVNPESVLLPKLLFFRSIGLTSSDTAKLISNCPTTLSLSLQNRLIPCYDSLKSILVEKESILKCLRRGYWIFTLDTVKYLAARLSLCRDAGVKDQSIRRLVQNGPLVFFCSERKFNEVLTRVRSFGFDPKKMYFIHAMLV
Bra014385.1-P
mTERF
192
369
LDTVKYLAARLSLCRDAGVKDQSIRRLVQNGPLVFFCSERKFNEVLTRVRSFGFDPKKMYFIHAMLVFSHVSESTVERKFELYQQFGWSRGEFVAAFMRFPNCVKISDEKIKGTMEYLVNDAGLKAGAVAMQPFVLGLSLEKRIKPRNMVISELLSKGFVKREDLNYFQILKVKECVF
Links
Other
mTERF
family TFs
Other
Brassica rapa
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo4g098440
Brassica oleracea
Bo4g098440
N
0.917
Carubv10017414m.g
Capsella rubella
Carubv10017414m.g
N
0.826
Cagra.0664s0028
Capsella grandiflora
Cagra.0664s0028
N
0.823
Thhalv10006396m.g
Eutrema salsugineum
Thhalv10006396m.g
N
0.820
Bostr.13158s0292
Boechera stricta
Bostr.13158s0292
N
0.820
scaffold_503572.1
Arabidopsis lyrata
scaffold_503572.1
N
0.820