CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0664s0028
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.0664s0028
T264614_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0664s0028.1.p
mTERF
98
262
LTLLKNSGFTSEQIIRVVKSFPTILIVNPEVVLLPKLSFFRSIGLSSSDTAKLISNCPTTLSLSLTNRLIPCYDSLKSILGEQENVLKCLRRGYWIFTLDTAKFLATRLSLCRDIGVRDQSIKRLVQNGPLVFFCSERKFNEVLNRVRDFGFDPKKMYFVHAMLV
Cagra.0664s0028.1.p
mTERF
190
374
GYWIFTLDTAKFLATRLSLCRDIGVRDQSIKRLVQNGPLVFFCSERKFNEVLNRVRDFGFDPKKMYFVHAMLVFFHVSEFTMEHKFGLYQQFGWSKEDCVAAFMRFPNCVKISDEKITGTMEYLINNVGLPPGTIAMQPFVLGLSLEKRIKPRNMVISELLFKGFVKKEDLNYFQILKIKDCVFV
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10017414m.g
Capsella rubella
Carubv10017414m.g
N
0.991
Bostr.13158s0292
Boechera stricta
Bostr.13158s0292
N
0.934
scaffold_503572.1
Arabidopsis lyrata
scaffold_503572.1
N
0.933
Thhalv10006396m.g
Eutrema salsugineum
Thhalv10006396m.g
N
0.845
Bo4g098440
Brassica oleracea
Bo4g098440
N
0.835
Bra014385
Brassica rapa
Bra014385
N
0.823