CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.5109s0001
(
Boechera stricta
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Bostr.5109s0001
T264598_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.5109s0001.1.p
mTERF
146
312
FSESRFNLQARTVIEDSNFVPLVRWLKHHEFSYNRIAKIICMSKGNLDSIRIMIEWLKTIHVKGEFIGVAFLRSGDNILQRSREELDEIVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGYFSFEEMEKKINYLKEF
Bostr.5109s0001.1.p
mTERF
274
407
LKMGMNQNDFGTMVYDYPKIIGYFSFEEMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGISKERMKRILVVKPILYCIDLEKTIAPKEMGIPNEAIGNMLVKFPSLLTNSLYKKIRP
Links
Other
mTERF
family TFs
Other
Boechera stricta
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EMB2219
Arabidopsis lyrata
fgenesh2_kg.4__96__AT2G21710.1
N
0.966
Cagra.0157s0011
Capsella grandiflora
Cagra.0157s0011
N
0.918
MTERF2
Arabidopsis thaliana
AT2G21710
N
0.866
POPTR_0009s11900
Populus trichocarpa
POPTR_0009s11900
N
0.709
SapurV1A.0037s0440
Salix purpurea
SapurV1A.0037s0440
N
0.701