CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0043s0023
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.0043s0023
T264608_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0043s0023.1.p
mTERF
91
436
LSLLRSHGFTDSQISNIVTNYPKLLVADAEMSLGPKLQFLLSRGASSSELTQIVSTVPEILGKNAGKTISRYYDFIKEVLEADKSSKNEKLSQSLPEKGNRQGNKIRNVLVLRELGVPQKLLFSLLISDAQPVCGKENFEESLKKVVEMGFDPKTSRFVHALKVIYRYSEKTIEEKVNVCKGLGFAVEDVWKMFKKSPTFLNNSEKKIKQTFETLKKCGLLEDEVLSVMKRFPQCIGASEKKILNTIETFLCLGFSKDEFVILAKRFPQCLILSGKTVTKKTEFVVKKMNWPLKSVISTPSMLGYSLEKRTVPRCNVIKALMAKGLLGSELPLMSSVLVCSNEEFL
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10020276m.g
Capsella rubella
Carubv10020276m.g
N
0.913
Carubv10020262m.g
Capsella rubella
Carubv10020262m.g
N
0.830
Bostr.22157s0138
Boechera stricta
Bostr.22157s0138
N
0.817
AT1G62085
Arabidopsis thaliana
AT1G62085
N
0.772
Bostr.22157s0164
Boechera stricta
Bostr.22157s0164
N
0.747
AT1G62110
Arabidopsis thaliana
AT1G62110
N
0.740
Bostr.22157s0123
Boechera stricta
Bostr.22157s0123
I
0.706