CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Carubv10020276m.g
(
Capsella rubella
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Carubv10020276m.g
T264657_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10020276m
mTERF
85
429
LSLFRSNGFTKSQISSIVMDYPQLLVLDAEKSLAPKLQFLLSRGASRSDLTEIVSTVPEILGRKAGQTISRYYDFIKEVIEADKSSKYETLCQSLPEGNRQGNKIRNVLVLRELGVPQKLLFSLLISDAQPVCGKENFEESLKKVVEMGFDPTTSRFVHALKVIYKYSEKTIEEKVNVCKGLGFAVEDVWKMFKKSPTFMNNSEKKIVQTFETLKKCGLLEDEVLSVMKRFPQCIGASEKKILNTIETFLCLGFSKDEFVILAKRFPQCLILSGKTVTKKTEFVVKKMNWPLKSVISTPSMLGYSLEKRTVPRCNVIKALMAKGLLGSELPLMSSVLVCSNEEFL
Links
Other
mTERF
family TFs
Other
Capsella rubella
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0043s0023
Capsella grandiflora
Cagra.0043s0023
N
0.913
Bostr.22157s0138
Boechera stricta
Bostr.22157s0138
N
0.826
Carubv10020262m.g
Capsella rubella
Carubv10020262m.g
N
0.797
AT1G62085
Arabidopsis thaliana
AT1G62085
N
0.768
AT1G62110
Arabidopsis thaliana
AT1G62110
N
0.756
Bostr.22157s0164
Boechera stricta
Bostr.22157s0164
N
0.730