Bra013900 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra013900 T267864_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra013900.1-P Myb 16 63
Bra013900.1-P Myb 69 114

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g040300 Brassica oleracea Bo1g040300 N 0.885
Bra019154 Brassica rapa Bra019154 N 0.880
Bo7g110400 Brassica oleracea Bo7g110400 N 0.864
LAF1 Arabidopsis thaliana AT4G25560 I 0.840
Thhalv10026022m.g Eutrema salsugineum Thhalv10026022m.g N 0.823
Carubv10007732m.g Capsella rubella Carubv10007732m.g I 0.819
Bostr.7867s0367 Boechera stricta Bostr.7867s0367 I 0.819
Cagra.23907s0010 Capsella grandiflora Cagra.23907s0010 I 0.819
AtMYB18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001401 I 0.801
Cagra.0094s0035 Capsella grandiflora Cagra.0094s0035 I 0.794
Carubv10027541m.g Capsella rubella Carubv10027541m.g I 0.794
AtMYB19 Arabidopsis thaliana AT5G52260 I 0.783
Bostr.7305s0041 Boechera stricta Bostr.7305s0041 I 0.783
Bra029129 Brassica rapa Bra029129 I 0.783
Bo3g023270 Brassica oleracea Bo3g023270 I 0.783
AtMYB19 Arabidopsis lyrata fgenesh2_kg.8__1111__AT5G52260.1 I 0.783
Thhalv10014388m.g Eutrema salsugineum Thhalv10014388m.g I 0.774
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.705
Eucgr.K00250 Eucalyptus grandis Eucgr.K00250 I 0.705
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.695
Si012304m.g Setaria italica Si012304m.g I 0.693
Pavir.Gb00734 Panicum virgatum Pavir.Gb00734 I 0.693
Pavir.Ga00879 Panicum virgatum Pavir.Ga00879 I 0.693
Traes_2BL_7CEC6A8D7 Triticum aestivum Traes_2BL_7CEC6A8D7 I 0.692
MLOC_73614 Hordeum vulgare MLOC_73614 I 0.692
Traes_2AL_2D4100475 Triticum aestivum Traes_2AL_2D4100475 I 0.692
TRIUR3_15020 Triticum urartu TRIUR3_15020 I 0.692
Traes_2BL_35241DE8D Triticum aestivum Traes_2BL_35241DE8D I 0.692
MTR_1g100667 Medicago truncatula MTR_1g100667 I 0.691
Cla006288 Citrullus lanatus Cla006288 I 0.687
TCM_015157 Theobroma cacao TCM_015157 I 0.686
GLYMA10G38110 Glycine max GLYMA10G38110 I 0.686
GLYMA20G29710 Glycine max GLYMA20G29710 I 0.686
OS04G0532800 Oryza sativa OS04G0532800 I 0.684
ONIVA04G17950 Oryza nivara ONIVA04G17950 I 0.684
OMERI04G16730 Oryza meridionalis OMERI04G16730 I 0.684
OBART04G19730 Oryza barthii OBART04G19730 I 0.684
BGIOSGA016820 Oryza indica BGIOSGA016820 I 0.684
OPUNC04G17450 Oryza punctata OPUNC04G17450 I 0.684
OGLUM04G19590 Oryza glumaepatula OGLUM04G19590 I 0.684
ORGLA10G0151700 Oryza glaberrima ORGLA10G0151700 I 0.684
ORGLA04G0168700 Oryza glaberrima ORGLA04G0168700 I 0.684
ORUFI04G21270 Oryza rufipogon ORUFI04G21270 I 0.684
GSMUA_Achr9G11190_001 Musa acuminata GSMUA_Achr9G11190_001 I 0.681
Ca_19758 Cicer arietinum Ca_19758 I 0.679
chr5.CM0148.380.nc Lotus japonicus chr5.CM0148.380.nc I 0.679
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.679
PK18276.1 Cannabis sativa PK18276.1 I 0.677
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I 0.675
Traes_2AL_AF9357B4C Triticum aestivum Traes_2AL_AF9357B4C N 0.672
Gorai.008G277900 Gossypium raimondii Gorai.008G277900 I 0.671
Traes_2BL_604FE7639 Triticum aestivum Traes_2BL_604FE7639 I 0.671
Traes_2AL_962A9D448 Triticum aestivum Traes_2AL_962A9D448 I 0.671
Traes_2BL_03F3475CD Triticum aestivum Traes_2BL_03F3475CD I 0.671
BRADI5G16672 Brachypodium distachyon BRADI5G16672 I 0.671
GLYMA09G25655 Glycine max GLYMA09G25655 I 0.669
AtMYB45 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001377 I 0.668
Cucsa.107740 Cucumis sativus Cucsa.107740 I 0.668
Bra035097 Brassica rapa Bra035097 I 0.666
Pavir.Ab02417 Panicum virgatum Pavir.Ab02417 I 0.666
AtMYB45 Arabidopsis thaliana AT3G48920 I 0.664
F775_08647 Aegilops tauschii F775_08647 I 0.663
LPERR04G16000 Leersia perrieri LPERR04G16000 I 0.663
Traes_6BL_CE61B9510 Triticum aestivum Traes_6BL_CE61B9510 I 0.663
Traes_6AL_D10CBA40D Triticum aestivum Traes_6AL_D10CBA40D I 0.663
Traes_6DL_A014E9069 Triticum aestivum Traes_6DL_A014E9069 I 0.663
TRIUR3_32691 Triticum urartu TRIUR3_32691 I 0.663
GRMZM2G170049 Zea mays GRMZM2G170049 I 0.663
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.663
evm.TU.supercontig_107.47 Carica papaya evm.TU.supercontig_107.47 I 0.662
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I 0.661
mgf024114m Mimulus guttatus mgf024114m I 0.661