GLYMA08G43000 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA08G43000 T271447_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.673 0.824
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.673 0.824
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA08G43000.2 Myb 9 39
GLYMA08G43000.2 Myb 45 88

Links

Other Myb/SANT family TFs
Other Glycine max TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_7DS_8DF2537B8 Triticum aestivum Traes_7DS_8DF2537B8 I 0.827
LjSGA_057622.2 Lotus japonicus LjSGA_057622.2 I 0.767
GSMUA_Achr7G00280_001 Musa acuminata GSMUA_Achr7G00280_001 I 0.751
Pm011812 Prunus mume Pm011812 I 0.747
LjT02G13.10.nc Lotus japonicus LjT02G13.10.nc I 0.734
GLYMA08G42920 Glycine max GLYMA08G42920 I 0.723
Ca_20081 Cicer arietinum Ca_20081 I 0.717
GLYMA08G42955 Glycine max GLYMA08G42955 I 0.716
MTR_3g052430 Medicago truncatula MTR_3g052430 I 0.712
MLOC_6041 Hordeum vulgare MLOC_6041 I 0.712
TRIUR3_20797 Triticum urartu TRIUR3_20797 I 0.709
F775_23034 Aegilops tauschii F775_23034 I 0.709
GLYMA18G10921 Glycine max GLYMA18G10921 I 0.709
ONIVA04G15310 Oryza nivara ONIVA04G15310 I 0.697
OMERI03G21920 Oryza meridionalis OMERI03G21920 I 0.697
OPUNC03G22220 Oryza punctata OPUNC03G22220 I 0.697
OLONG_025057 Oryza longistaminata OLONG_025057 I 0.697
OS03G0578900 Oryza sativa OS03G0578900 I 0.697
ORUFI03G24730 Oryza rufipogon ORUFI03G24730 I 0.697
ORGLA03G0224700 Oryza glaberrima ORGLA03G0224700 I 0.697
OGLUM03G24880 Oryza glumaepatula OGLUM03G24880 I 0.697
OB03G32840 Oryza brachyantha OB03G32840 I 0.697
OBART03G24120 Oryza barthii OBART03G24120 I 0.697
PK15478.1 Cannabis sativa PK15478.1 I 0.692
Ciclev10010620m.g Citrus clementina Ciclev10010620m.g I 0.684
orange1.1g046419m.g Citrus sinensis orange1.1g046419m.g I 0.684
MTR_3g052450 Medicago truncatula MTR_3g052450 I 0.683
LPERR03G20110 Leersia perrieri LPERR03G20110 I 0.677
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I 0.673
F775_28392 Aegilops tauschii F775_28392 I 0.673
TRIUR3_27104 Triticum urartu TRIUR3_27104 I 0.673
Gam1 Hordeum vulgare Q96464_HORVU D 0.673
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.673
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I 0.673
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I 0.673
Si000907m.g Setaria italica Si000907m.g I 0.673
cassava40302.m1 Manihot esculenta cassava40302.m1 I 0.671
mgf002965m Mimulus guttatus mgf002965m I 0.671
Si039629m.g Setaria italica Si039629m.g I 0.671
AC217264.3_FG005 Zea mays AC217264.3_FG005 I 0.671
Sb01g015920 Sorghum bicolor Sb01g015920 I 0.671
GRMZM2G070523 Zea mays GRMZM2G070523 I 0.671
Pavir.Ib03827 Panicum virgatum Pavir.Ib03827 I 0.671
GRMZM2G139688 Zea mays GRMZM2G139688 I 0.669
BGIOSGA013008 Oryza indica BGIOSGA013008 N 0.669
Cla005406 Citrullus lanatus Cla005406 I 0.668
GSMUA_Achr4G23690_001 Musa acuminata GSMUA_Achr4G23690_001 I 0.667
Lus10040063.g Linum usitatissimum Lus10040063.g I 0.667
gene03321-v1.0-hybrid Fragaria vesca gene03321-v1.0-hybrid I 0.664
GSMUA_Achr1G17150_001 Musa acuminata GSMUA_Achr1G17150_001 I 0.664
PRUPE_ppa003628mg Prunus persica PRUPE_ppa003628mg I 0.662
Pm016605 Prunus mume Pm016605 I 0.662
gene00431-v1.0-hybrid Fragaria vesca gene00431-v1.0-hybrid I 0.662
MDP0000147309 Malus domestica MDP0000147309 I 0.662
MYB101 Vitis vinifera VIT_12s0059g00700 I 0.661