CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB01G55080
(
Oryza brachyantha
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OB01G55080
T275214_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB01G55080.1
Myb
5
51
KGSWSSEEDALLTRLVGQHGPHRWSLISAAIPGRSGKSCRLRWCNQL
OB01G55080.1
Myb
57
102
HRPFTPQEDALLAAARARLGNKWATIARLLPGRTDNSVKNHWNSNL
Links
Other
Myb/SANT
family TFs
Other
Oryza brachyantha
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC01G44800
Oryza punctata
OPUNC01G44800
N
0.881
ORUFI01G49370
Oryza rufipogon
ORUFI01G49370
N
0.877
OS01G0977300
Oryza sativa
OS01G0977300
N
0.877
BGIOSGA000003
Oryza indica
BGIOSGA000003
N
0.877
ONIVA01G52120
Oryza nivara
ONIVA01G52120
N
0.877
ORGLA01G0396300
Oryza glaberrima
ORGLA01G0396300
N
0.877
OGLUM01G50230
Oryza glumaepatula
OGLUM01G50230
N
0.877
OBART01G45880
Oryza barthii
OBART01G45880
N
0.877
Pavir.Cb00156
Panicum virgatum
Pavir.Cb00156
I
0.855
GRMZM2G369799
Zea mays
GRMZM2G369799
I
0.855
Pavir.Ca02945
Panicum virgatum
Pavir.Ca02945
I
0.855
OLONG_011153
Oryza longistaminata
OLONG_011153
N
0.854
Sb0088s002210
Sorghum bicolor
Sb0088s002210
N
0.819
Si022959m.g
Setaria italica
Si022959m.g
I
0.782
Traes_4AS_A79A68739
Triticum aestivum
Traes_4AS_A79A68739
N
0.776
Traes_4DL_D41CB81EA
Triticum aestivum
Traes_4DL_D41CB81EA
I
0.776
Traes_4BL_545A5716E
Triticum aestivum
Traes_4BL_545A5716E
I
0.776
LPERR01G40230
Leersia perrieri
LPERR01G40230
I
0.732
Lus10040940.g
Linum usitatissimum
Lus10040940.g
I
0.710
Lus10028979.g
Linum usitatissimum
Lus10028979.g
I
0.709
Cucsa.368410
Cucumis sativus
Cucsa.368410
I
0.699
TCM_042474
Theobroma cacao
TCM_042474
I
0.691
29814.m000736
Ricinus communis
29814.m000736
I
0.690
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
0.690
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
0.690
SapurV1A.0650s0070
Salix purpurea
SapurV1A.0650s0070
I
0.690
Lus10007503.g
Linum usitatissimum
Lus10007503.g
I
0.676
Gorai.012G078200
Gossypium raimondii
Gorai.012G078200
I
0.673
Cla004431
Citrullus lanatus
Cla004431
I
0.673
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
0.672
Ciclev10032317m.g
Citrus clementina
Ciclev10032317m.g
I
0.672
orange1.1g046570m.g
Citrus sinensis
orange1.1g046570m.g
I
0.672
chr2.CM0002.110.nc
Lotus japonicus
chr2.CM0002.110.nc
I
0.671
MDP0000298689
Malus domestica
MDP0000298689
I
0.670
Aquca_045_00169
Aquilegia coerulea
Aquca_045_00169
I
0.663
Cla020946
Citrullus lanatus
Cla020946
I
0.661